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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "Connectome" in publications use:'
type: software
license: GPL-3.0-only
title: 'Connectome: Single Cell Connectomics'
version: 1.0.2
doi: 10.32614/CRAN.package.Connectome
abstract: A toolkit for exploring cell-cell connectivity patterns based on ligand
  and receptor expression in heterogeneous single-cell datasets. Implements methods
  for constructing, filtering, and visualizing connectomic networks from single-cell
  RNA sequencing data. Supports multiple species via the FANTOM5 ligand-receptor database.
  Methods described in Raredon et al (2022) <https://doi.org/10.1038/s41598-022-07959-x>.
authors:
- family-names: Liu
  given-names: Zaoqu
  email: liuzaoqu@163.com
  orcid: https://orcid.org/0000-0002-0452-742X
- family-names: Brickman Raredon
  given-names: Micha Sam
  email: michasam.raredon@yale.edu
repository: https://zaoqu-liu.r-universe.dev
repository-code: https://github.com/Zaoqu-Liu/Connectome
commit: 956f1e43d8946563404cb28de2c5137f6ea86ff5
url: https://zaoqu-liu.github.io/Connectome
date-released: '2026-01-23'
contact:
- family-names: Liu
  given-names: Zaoqu
  email: liuzaoqu@163.com
  orcid: https://orcid.org/0000-0002-0452-742X