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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "METAFLUX" in publications use:'
type: software
license: MIT
title: 'METAFLUX: High-Performance Metabolic Flux Analysis from Bulk and Single-Cell
  RNA-seq Data'
version: 2.2.0
doi: 10.32614/CRAN.package.METAFLUX
abstract: A performance-optimized implementation of METAFlux for characterizing cellular
  metabolism from bulk and single-cell RNA-sequencing data. Uses genome-scale metabolic
  modeling with Human-GEM to derive 13,082 metabolic fluxes through flux balance analysis
  (FBA). Features parallel computing, Rcpp acceleration, and optimized algorithms
  for 10-20x faster computation.
authors:
- family-names: Liu
  given-names: Zaoqu
  email: liuzaoqu@163.com
  orcid: https://orcid.org/0000-0002-0452-742X
- family-names: Huang
  given-names: Yuefan
  email: YHuang15@mdanderson.org
- family-names: Tsai
  given-names: Kyle
  email: kyletsai2003@gmail.com
repository: https://zaoqu-liu.r-universe.dev
repository-code: https://github.com/Zaoqu-Liu/METAFlux
commit: 00531df233e5f6d52d09ea15ca86b2d480e0578a
url: https://zaoqu-liu.github.io/METAFlux/
date-released: '2026-01-23'
contact:
- family-names: Liu
  given-names: Zaoqu
  email: liuzaoqu@163.com
  orcid: https://orcid.org/0000-0002-0452-742X