{
  "_id": "6a12cf26acfb0bcc41d21c2e",
  "Package": "yaGST",
  "Type": "Package",
  "Title": "Competitive gene set and regulon tests.",
  "Version": "2017.08.25",
  "Date": "2017-08-01",
  "Author": "Stefano M. Pagnotta",
  "Maintainer": "Stefano M. Pagnotta <smpagnotta@gmail.com>",
  "Description": "This is a collection of wrappers to the Wilcoxon test to\nrun competitive gene set and regulon tests.",
  "License": "GPL (>= 3)",
  "VignetteBuilder": "knitr",
  "Repository": "https://zaoqu-liu.r-universe.dev",
  "Date/Publication": "2017-11-02 10:44:55 UTC",
  "RemoteUrl": "https://github.com/miccec/yaGST",
  "RemoteRef": "master",
  "RemoteSha": "56227df3ae183070c9d156af11c306ee799435e6",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-24 10:08:12 UTC",
    "User": "root"
  },
  "MD5sum": "ccd5dfde323582dc6bcec32581eb030e",
  "_user": "zaoqu-liu",
  "_type": "src",
  "_file": "yaGST_2017.08.25.tar.gz",
  "_fileid": "a7e7343b420eac4dbb9e4cd334ff3c0af9ba9beacd8c05d51ab124c42c931d8c",
  "_filesize": 321631,
  "_sha256": "a7e7343b420eac4dbb9e4cd334ff3c0af9ba9beacd8c05d51ab124c42c931d8c",
  "_created": "2026-05-24T10:08:12.000Z",
  "_published": "2026-05-24T10:12:54.291Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77589216752,
      "time": 238,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "7184289208"
    },
    {
      "job": 77589216785,
      "time": 244,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7184289690"
    },
    {
      "job": 77589216790,
      "time": 102,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "ERROR",
      "artifact": "7184276159"
    },
    {
      "job": 77589216770,
      "time": 122,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7184278189"
    },
    {
      "job": 77589095019,
      "time": 140,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7184266189"
    },
    {
      "job": 77589216743,
      "time": 101,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7184276079"
    },
    {
      "job": 77589216806,
      "time": 177,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "7184283540"
    },
    {
      "job": 77589216818,
      "time": 258,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "ERROR",
      "artifact": "7184291009"
    },
    {
      "job": 77589216824,
      "time": 171,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7184282954"
    }
  ],
  "_buildurl": "https://github.com/r-universe/zaoqu-liu/actions/runs/26358326893",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/miccec/yaGST",
  "_commit": {
    "id": "56227df3ae183070c9d156af11c306ee799435e6",
    "author": "miccec <m.ceccarelli@gmail.com>",
    "committer": "miccec <m.ceccarelli@gmail.com>",
    "message": "update\n",
    "time": 1509619495
  },
  "_maintainer": {
    "name": "Stefano M. Pagnotta",
    "email": "smpagnotta@gmail.com",
    "login": "stefanomp",
    "description": "",
    "uuid": 18364052
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "doParallel",
      "version": ">= 1.0.10",
      "role": "Depends"
    },
    {
      "package": "R",
      "version": ">= 3.0",
      "role": "Depends"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "doParallel",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "miccec",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 14,
  "_contributors": [
    {
      "user": "miccec",
      "count": 24,
      "uuid": 2706649
    }
  ],
  "_userbio": {
    "uuid": 68080738,
    "type": "user",
    "name": "LIU Zaoqu",
    "description": "AI4S"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/yaGST"
  },
  "_devurl": "https://github.com/miccec/yagst",
  "_searchresults": 33,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/yaGST.html",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "eeMWW",
    "gmt2GO",
    "GO2gmt",
    "mwwExtGST",
    "mwwGST",
    "plot.mwwExtGST",
    "plot.mwwGST",
    "print.mwwExtGST",
    "print.mwwGST"
  ],
  "_datasets": [
    {
      "name": "rankedList",
      "title": "An example of pre-ranked list.",
      "object": "rankedList",
      "file": "rankedList.rda",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "yaGST-package",
      "title": "Competitive gene set and regulon tests.",
      "topics": [
        "yaGST-package"
      ]
    },
    {
      "page": "eeMWW",
      "title": "eeMWW",
      "topics": [
        "eeMWW"
      ]
    },
    {
      "page": "gmt2GO",
      "title": "Read a .gmt file and generate a list of gene set sequences.",
      "topics": [
        "gmt2GO"
      ]
    },
    {
      "page": "GO2gmt",
      "title": "Generate a .gmt file from a list of gene set sequences.",
      "topics": [
        "GO2gmt"
      ]
    },
    {
      "page": "mwwExtGST",
      "title": "Competitive Regulon Test",
      "topics": [
        "mwwExtGST"
      ]
    },
    {
      "page": "mwwGST",
      "title": "Competitive Gene Set Test",
      "topics": [
        "mwwGST"
      ]
    },
    {
      "page": "rankedList",
      "title": "An example of pre-ranked list.",
      "topics": [
        "rankedList"
      ]
    }
  ],
  "_readme": "https://github.com/miccec/yaGST/raw/master/README.md",
  "_rundeps": [
    "cli",
    "codetools",
    "cpp11",
    "doParallel",
    "farver",
    "foreach",
    "ggplot2",
    "glue",
    "gtable",
    "isoband",
    "iterators",
    "labeling",
    "lifecycle",
    "R6",
    "RColorBrewer",
    "rlang",
    "S7",
    "scales",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_score": 3.3636119798921444,
  "_indexed": false,
  "_nocasepkg": "yagst",
  "_universes": [
    "zaoqu-liu"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2017.08.25",
      "date": "2026-05-24T10:10:07.000Z",
      "distro": "noble",
      "commit": "56227df3ae183070c9d156af11c306ee799435e6",
      "fileid": "4bbd449e0b61165bfa952d79cd353fb3e37b78b3a7d69328550bb0a032f13345",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/zaoqu-liu/actions/runs/26358326893"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2017.08.25",
      "date": "2026-05-24T10:10:10.000Z",
      "distro": "noble",
      "commit": "56227df3ae183070c9d156af11c306ee799435e6",
      "fileid": "5c578c6fc5d1d08e7ac8cd494403ec2dcd436e301308631a2bfc13b720f8d6a8",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/zaoqu-liu/actions/runs/26358326893"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "2017.08.25",
      "date": "2026-05-24T10:09:21.000Z",
      "commit": "56227df3ae183070c9d156af11c306ee799435e6",
      "fileid": "979acd01ae23af834f0a1340f75ca313b4185b12f6240b1bfc06400ed132a6f1",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/zaoqu-liu/actions/runs/26358326893"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "2017.08.25",
      "date": "2026-05-24T10:09:37.000Z",
      "commit": "56227df3ae183070c9d156af11c306ee799435e6",
      "fileid": "76efac0cb8ef0a0bce50ebdf11e7be5072da9bda523d7f779dde2516457b825b",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/zaoqu-liu/actions/runs/26358326893"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "2017.08.25",
      "date": "2026-05-24T10:10:06.000Z",
      "commit": "56227df3ae183070c9d156af11c306ee799435e6",
      "fileid": "1229af734f7a57e7117abe9ba161c4a6c55534a5e3540e97f1995abc0a8cdbec",
      "status": "success",
      "buildurl": "https://github.com/r-universe/zaoqu-liu/actions/runs/26358326893"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "2017.08.25",
      "date": "2026-05-24T10:09:19.000Z",
      "commit": "56227df3ae183070c9d156af11c306ee799435e6",
      "fileid": "6ed3a5d2ac31ccaee3a2afd5558875181564da8695bae2b12c314985d6898351",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/zaoqu-liu/actions/runs/26358326893"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "2017.08.25",
      "date": "2026-05-24T10:10:13.000Z",
      "commit": "56227df3ae183070c9d156af11c306ee799435e6",
      "fileid": "097227bde1d5554d72730c96e44224904c9d998c7e48a57a03238b1fb940162d",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/zaoqu-liu/actions/runs/26358326893"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "2017.08.25",
      "date": "2026-05-24T10:09:14.000Z",
      "commit": "56227df3ae183070c9d156af11c306ee799435e6",
      "fileid": "062db16bb5b83d2dad0686a3a8c4c178bd60c5d1e4fe923cc15dcc2a4428e2b8",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/zaoqu-liu/actions/runs/26358326893"
    }
  ]
}