Morabito et al. hdWGCNA identifies co-expression networks in high-dimensional transcriptomics data. Cell Reports Methods (2023) [hdWGCNA]

Childs et al. Transcription Factor Regulatory Network Analysis in hdWGCNA. Cell Reports (2024)

Morabito et al. Original implementation of single-cell WGCNA (scWGCNA). Nature Genetics (2021)

Corresponding BibTeX entries:

  @Article{,
    title = {hdWGCNA identifies co-expression networks in
      high-dimensional transcriptomics data.},
    author = {Samuel Morabito and Fairlie Reese and Negin Rahimzadeh
      and Emily Miyoshi and Vivek Swarup},
    journal = {Cell Reports Methods},
    year = {2023},
    url =
      {https://www.cell.com/cell-reports-methods/fulltext/S2667-2375(23)00127-3},
  }

  @Article{,
    title = {Relapse to cocaine seeking is regulated by medial habenula
      NR4A2/NURR1 in mice},
    author = {Jessica E. Childs and Samuel Morabito and Sudeshna Das
      and Caterina Santelli and Victoria Pham and Kelly Kusche and
      Vanessa Alizo Vera and Fairlie Reese and Rianne R. Campbell and
      Dina P. Matheos and Vivek Swarup and Marcelo A. Wood},
    journal = {Cell Reports},
    year = {2024},
    url =
      {https://www.sciencedirect.com/science/article/pii/S2211124724002845},
  }

  @Article{,
    title = {Single-nucleus chromatin accessibility and transcriptomic
      characterization of Alzheimer's disease},
    author = {Samuel Morabito and Emily Miyoshi and Neethu Michael and
      Saba Shahin and Alessandra Cadete Martini and Elizabeth Head and
      Justine Silva and Kelsey Leavy and Mari Perez-Rosendahl and Vivek
      Swarup},
    journal = {Nature Genetics},
    year = {2021},
    url = {https://doi.org/10.1038/s41588-021-00894-z},
  }