---
title: 'Working with multiple conditions'
author: "Zaoqu Liu, Kelly Street, Koen Van den Berge and Hector Roux de Bézieux"
date: "01/24/2026"
output: 
  rmarkdown::html_document:
    toc: true
    toc_depth: 3
vignette: >
  %\VignetteIndexEntry{Differential expression across conditions}
  %\VignetteEngine{knitr::rmarkdown}
  %\VignetteEncoding{UTF-8}
---

If your dataset contains multiple conditions, please see our [Bioconductor Workshop](https://kstreet13.github.io/bioc2020trajectories/articles/workshopTrajectories.html) on 'Trajectory inference across conditions: differential expression and differential progression'.
