Case Study: Glioblastoma AnalysisUpdated 4 months ago

Zaoqu Liu, Robert K. Suter, Nagi G. Ayad

Rendered from case-study-gbm.Rmd in scFOCAL 0.1.0.
Algorithm PrinciplesUpdated 4 months ago

Zaoqu Liu, Robert K. Suter, Nagi G. Ayad

Rendered from algorithm-principles.Rmd in scFOCAL 0.1.0.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu, Robert K. Suter, Nagi G. Ayad

Rendered from quick-start.Rmd in scFOCAL 0.1.0.
Statistical FrameworkUpdated 4 months ago

Zaoqu Liu, Robert K. Suter, Nagi G. Ayad

Rendered from statistical-framework.Rmd in scFOCAL 0.1.0.
Visualization GalleryUpdated 4 months ago

Zaoqu Liu, Robert K. Suter, Nagi G. Ayad

Rendered from visualization-gallery.Rmd in scFOCAL 0.1.0.
Advanced UsageUpdated 4 months ago

Zaoqu Liu

Rendered from advanced-usage.Rmd in MOFSR 2.3.0.
Algorithm Principles in MOFSRUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm-principles.Rmd in MOFSR 2.3.0.
Benchmark AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from benchmark.Rmd in MOFSR 2.3.0.
Getting Started with MOFSRUpdated 4 months ago

Zaoqu Liu

Rendered from MOFSR.Rmd in MOFSR 2.3.0.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization-guide.Rmd in MOFSR 2.3.0.
Advanced Usage and Best PracticesUpdated 4 months ago

Zaoqu Liu

Rendered from advanced-usage.Rmd in SCORPION 1.2.2.
Algorithm and Mathematical FrameworkUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in SCORPION 1.2.2.
Network VisualizationUpdated 4 months ago

Zaoqu Liu

Rendered from network-visualization.Rmd in SCORPION 1.2.2.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in SCORPION 1.2.2.
Mathematical Framework and AlgorithmUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in CellProgramMapper 1.0.0.
NNLS Solver Implementation DetailsUpdated 4 months ago

Zaoqu Liu

Rendered from nnls-solver.Rmd in CellProgramMapper 1.0.0.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quickstart.Rmd in CellProgramMapper 1.0.0.
Building Custom ReferencesUpdated 4 months ago

Zaoqu Liu

Rendered from custom-reference.Rmd in CellProgramMapper 1.0.0.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in CellProgramMapper 1.0.0.
Advanced UsageUpdated 4 months ago

Zaoqu Liu

Rendered from advanced.Rmd in NOVA 1.0.0.
Algorithm & MethodologyUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in NOVA 1.0.0.
Differential Communication AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from differential.Rmd in NOVA 1.0.0.
Getting Started with NOVAUpdated 4 months ago

Zaoqu Liu

Rendered from getting_started.Rmd in NOVA 1.0.0.
Multi-Species AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from multi_species.Rmd in NOVA 1.0.0.
Visualization GalleryUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in NOVA 1.0.0.
Algorithm Principles and Mathematical FoundationUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in scClustEval 1.0.0.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in scClustEval 1.0.0.
Seurat IntegrationUpdated 4 months ago

Zaoqu Liu

Rendered from seurat-integration.Rmd in scClustEval 1.0.0.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in scClustEval 1.0.0.
Advanced Usage and Best PracticesUpdated 4 months ago

Zaoqu Liu

Rendered from advanced-usage.Rmd in TorchDecon 1.0.0.
Algorithm and Mathematical FrameworkUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm-details.Rmd in TorchDecon 1.0.0.
Visualization and Result InterpretationUpdated 4 months ago

Zaoqu Liu

Rendered from visualization-tutorial.Rmd in TorchDecon 1.0.0.
Introduction to scClustEvalUpdated 4 months ago

Zaoqu Liu

Rendered from introduction.Rmd in scClustEval 1.0.0.
Introduction to TorchDeconUpdated 4 months ago

Zaoqu Liu

Rendered from TorchDecon-introduction.Rmd in TorchDecon 1.0.0.
Algorithm Theory: Neural ODE for Cellular DynamicsUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm-theory.Rmd in CellODE 1.0.0.
Advanced Usage and Best PracticesUpdated 4 months ago

Zaoqu Liu

Rendered from advanced-usage.Rmd in CellODE 1.0.0.
Getting Started with CellODEUpdated 4 months ago

Zaoqu Liu

Rendered from CellODE-quickstart.Rmd in CellODE 1.0.0.
Vector Field Analysis and VisualizationUpdated 4 months ago

Zaoqu Liu

Rendered from vector-field-analysis.Rmd in CellODE 1.0.0.
Algorithm Details: Mathematical Foundation of scaperUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm-details.Rmd in scaper 0.2.1.
Introduction to scaper: Cytokine Activity Estimation in Single CellsUpdated 4 months ago

Zaoqu Liu

Rendered from introduction.Rmd in scaper 0.2.1.
Cytokine Activity Estimation using SCAPE (Single cell transcriptomics-level Cytokine Activity Prediction and Estimation): An Analysis using the CytoSig database.Updated 4 months ago

Zaoqu Liu, Azka Javaid and H. Robert Frost

Rendered from scaper-vignette-CytoSig.Rmd in scaper 0.2.1.
Cytokine Activity Estimation using SCAPE (Single cell transcriptomics-level Cytokine Activity Prediction and Estimation): An Analysis using the Reactome database.Updated 4 months ago

Zaoqu Liu, Azka Javaid and H. Robert Frost

Rendered from scaper-vignette-Reactome.Rmd in scaper 0.2.1.
Visualization Guide for scaperUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in scaper 0.2.1.
Integration with SeuratUpdated 4 months ago

Zaoqu Liu

Rendered from seurat-integration.Rmd in MAGICR 1.0.0.
Introduction to MAGICRUpdated 4 months ago

Zaoqu Liu

Rendered from MAGICR-introduction.Rmd in MAGICR 1.0.0.
MAGIC Algorithm: Mathematical FoundationsUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm-theory.Rmd in MAGICR 1.0.0.
Performance BenchmarkingUpdated 4 months ago

Zaoqu Liu

Rendered from benchmarking.Rmd in MAGICR 1.0.0.
Dynamical Model Deep DiveUpdated 4 months ago

Zaoqu Liu

Rendered from dynamical-model.Rmd in scVeloR 0.1.0.
Mathematical Framework of RNA VelocityUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm-theory.Rmd in scVeloR 0.1.0.
Performance Optimization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from performance-guide.Rmd in scVeloR 0.1.0.
Velocity Model ComparisonUpdated 4 months ago

Zaoqu Liu

Rendered from model-comparison.Rmd in scVeloR 0.1.0.
Visualization GalleryUpdated 4 months ago

Zaoqu Liu

Rendered from visualization-gallery.Rmd in scVeloR 0.1.0.
scVeloR: RNA Velocity Analysis in RUpdated 4 months ago

Zaoqu Liu

Rendered from scVeloR-tutorial.Rmd in scVeloR 0.1.0.
Advanced UsageUpdated 4 months ago

Zaoqu Liu

Rendered from advanced.Rmd in darwin 1.0.0.
Algorithm Theory: NSGA-II for Gene SelectionUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in darwin 1.0.0.
Bulk RNA-seq DeconvolutionUpdated 4 months ago

Zaoqu Liu

Rendered from deconvolution.Rmd in darwin 1.0.0.
Getting Started with darwinUpdated 4 months ago

Zaoqu Liu

Rendered from darwin-intro.Rmd in darwin 1.0.0.
Performance BenchmarksUpdated 4 months ago

Zaoqu Liu

Rendered from benchmark.Rmd in darwin 1.0.0.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in darwin 1.0.0.
Algorithm PrinciplesUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in CytoSPACER 1.0.0.
Performance OptimizationUpdated 4 months ago

Zaoqu Liu

Rendered from performance.Rmd in CytoSPACER 1.0.0.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in CytoSPACER 1.0.0.
Seurat IntegrationUpdated 4 months ago

Zaoqu Liu

Rendered from seurat-integration.Rmd in CytoSPACER 1.0.0.
Visualization GalleryUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in CytoSPACER 1.0.0.
Algorithm PrinciplesUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm-principles.Rmd in CellOracleR 0.1.0.
Case Study: HematopoiesisUpdated 4 months ago

Zaoqu Liu

Rendered from case-study.Rmd in CellOracleR 0.1.0.
Getting Started with CellOracleRUpdated 4 months ago

Zaoqu Liu

Rendered from tutorial.Rmd in CellOracleR 0.1.0.
GRN Inference DetailsUpdated 4 months ago

Zaoqu Liu

Rendered from grn-inference.Rmd in CellOracleR 0.1.0.
Visualization GalleryUpdated 4 months ago

Zaoqu Liu

Rendered from visualization-gallery.Rmd in CellOracleR 0.1.0.
COMMOTR: Algorithm Theory and Mathematical FoundationUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm_theory.Rmd in COMMOTR 1.0.0.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick_start.Rmd in COMMOTR 1.0.0.
COMMOTR: Visualization GalleryUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in COMMOTR 1.0.0.
SpaGER: Algorithm and Mathematical FoundationUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in SpaGER 1.0.0.
SpaGER: Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from SpaGER_tutorial.Rmd in SpaGER 1.0.0.
SpaGER: Seurat Integration GuideUpdated 4 months ago

Zaoqu Liu

Rendered from seurat_integration.Rmd in SpaGER 1.0.0.
SpaGER: Visualization and AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in SpaGER 1.0.0.
COMMOTR: Cell-Cell Communication Analysis in Spatial TranscriptomicsUpdated 4 months ago

Zaoqu Liu

Rendered from COMMOTR_tutorial.Rmd in COMMOTR 1.0.0.
Advanced UsageUpdated 4 months ago

Zaoqu Liu

Rendered from advanced-usage.Rmd in scPharm 1.0.6.
Algorithm and MethodologyUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in scPharm 1.0.6.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in scPharm 1.0.6.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in scPharm 1.0.6.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quickstart.Rmd in tradeSeq 1.13.13.
Statistical Framework and AlgorithmUpdated 4 months ago

Zaoqu Liu

Rendered from statistical_framework.Rmd in tradeSeq 1.13.13.
Visualization GalleryUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in tradeSeq 1.13.13.
Working with multiple conditionsUpdated 4 months ago

Zaoqu Liu, Kelly Street, Koen Van den Berge and Hector Roux de Bézieux

Rendered from multipleConditions.Rmd in tradeSeq 1.13.13.
Using Monocle as input to tradeSeqUpdated 4 months ago

Zaoqu Liu, Koen Van den Berge and Hector Roux de Bézieux

Rendered from Monocle.Rmd in tradeSeq 1.13.13.
Fitting the models and additional control of fitGAM in tradeSeqUpdated 4 months ago

Zaoqu Liu, Koen Van den Berge and Hector Roux de Bézieux

Rendered from fitGAM.Rmd in tradeSeq 1.13.13.
The tradeSeq workflowUpdated 4 months ago

Zaoqu Liu, Koen Van den Berge and Hector Roux de Bézieux

Rendered from tradeSeq.Rmd in tradeSeq 1.13.13.
Algorithm & MethodologyUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm-methodology.Rmd in multinichenetr 2.1.0.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in multinichenetr 2.1.0.
Visualization GalleryUpdated 4 months ago

Zaoqu Liu

Rendered from visualization-gallery.Rmd in multinichenetr 2.1.0.
Advanced UsageUpdated 4 months ago

Zaoqu Liu

Rendered from advanced-usage.Rmd in recall 0.1.0.
Algorithm and MethodologyUpdated 4 months ago

Zaoqu Liu

Rendered from methodology.Rmd in recall 0.1.0.
Basic UsageUpdated 4 months ago

Zaoqu Liu

Rendered from basic-usage.Rmd in recall 0.1.0.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in recall 0.1.0.
Getting Started with SCEVANUpdated 4 months ago

Zaoqu Liu

Rendered from getting-started.Rmd in SCEVAN 1.0.6.
Intratumoral Heterogeneity in GlioblastomaUpdated 4 months ago

Zaoqu Liu

Rendered from IntratumoralHeterogeneityInGlioblastoma.Rmd in SCEVAN 1.0.6.
Multi-Sample Analysis (3 Samples)Updated 4 months ago

Zaoqu Liu

Rendered from multiSamples.Rmd in SCEVAN 1.0.6.
Multi-Sample Comparison AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from multi-sample-analysis.Rmd in SCEVAN 1.0.6.
Primary vs Metastasis Analysis (Head & Neck Cancer)Updated 4 months ago

Zaoqu Liu

Rendered from multiSamplesHeadNeck.Rmd in SCEVAN 1.0.6.
SCEVAN Algorithm and MethodologyUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in SCEVAN 1.0.6.
Seurat Integration GuideUpdated 4 months ago

Zaoqu Liu

Rendered from seurat-integration.Rmd in SCEVAN 1.0.6.
Single-Sample CNA AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from single-sample-analysis.Rmd in SCEVAN 1.0.6.
Intercellular Communication Analysis with OmnipathRUpdated 4 months ago

Zaoqu Liu, Dénes Türei, Julio Saez-Rodriguez

Rendered from intercell_communication.Rmd in OmnipathR 3.19.1.
OmnipathR: an R client for the OmniPath web serviceUpdated 4 months ago

Alberto Valdeolivas, Attila Gabor, Denes Turei, Julio Saez-Rodriguez

Rendered from omnipath_intro.Rmd in OmnipathR 3.19.1.
SecAct Algorithm: Ridge Regression with Permutation TestingUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in SecAct 1.0.1.
Identifier Translation and Mapping in OmnipathRUpdated 4 months ago

Zaoqu Liu, Dénes Türei, Julio Saez-Rodriguez

Rendered from id_translation.Rmd in OmnipathR 3.19.1.
Network Analysis and Visualization with OmnipathRUpdated 4 months ago

Zaoqu Liu, Dénes Türei, Julio Saez-Rodriguez

Rendered from network_analysis.Rmd in OmnipathR 3.19.1.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in iTALK 0.1.1.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in iTALK 0.1.1.
Algorithm Details and Mathematical FrameworkUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm-details.Rmd in MultiK 1.0.0.
Introduction to MultiKUpdated 4 months ago

Zaoqu Liu

Rendered from MultiK-introduction.Rmd in MultiK 1.0.0.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization-guide.Rmd in MultiK 1.0.0.
Advanced VisualizationUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in fastCNV 2.0.0.
Algorithm and MethodologyUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in fastCNV 2.0.0.
Introduction to fastCNVUpdated 4 months ago

Zaoqu Liu

Rendered from introduction.Rmd in fastCNV 2.0.0.
Introduction to ConnectomeUpdated 4 months ago

Zaoqu Liu

Rendered from introduction.Rmd in Connectome 1.0.2.
Visualization GalleryUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in Connectome 1.0.2.
Bulk RNA-seq Metabolic Flux AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from bulk_analysis.Rmd in METAFLUX 2.2.0.
Visualization Guide for METAFLUXUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in METAFLUX 2.2.0.
Building protein networks around drug-targets using OmnipathRUpdated 4 months ago

Attila Gabor, Alberto Valdeolivas, Julio Saez-Rodriguez

Rendered from drug_targets.Rmd in OmnipathR 3.19.1.
Building prior knowledge network (PKN) for COSMOSUpdated 4 months ago

Denes Turei

Rendered from cosmos.Rmd in OmnipathR 3.19.1.
The database manager in OmnipathRUpdated 4 months ago

Denes Turei

Rendered from db_manager.Rmd in OmnipathR 3.19.1.
Resource specific interaction attributesUpdated 4 months ago

Denes Turei

Rendered from extra_attrs.Rmd in OmnipathR 3.19.1.
OmniPath Bioconductor workshopUpdated 4 months ago

Denes Turei, Alberto Valdeolivas, Attila Gabor, Julio Saez-Rodriguez

Rendered from bioc_workshop.Rmd in OmnipathR 3.19.1.
Pathway constructionUpdated 4 months ago

Denes Turei

Rendered from paths.Rmd in OmnipathR 3.19.1.
Using NicheNet with OmnipathRUpdated 4 months ago

Denes Turei, Alberto Valdeolivas, Julio Saez-Rodriguez

Rendered from nichenet.Rmd in OmnipathR 3.19.1.
Best Practices and TroubleshootingUpdated 4 months ago

Zaoqu Liu

Rendered from best-practices.Rmd in MultiK 1.0.0.
Algorithm Principles and Mathematical FrameworkUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in Connectome 1.0.2.
Best Practices and TroubleshootingUpdated 4 months ago

Zaoqu Liu

Rendered from best-practices.Rmd in Connectome 1.0.2.
Differential Connectivity AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from differential-analysis.Rmd in Connectome 1.0.2.
SpaTalk for Different Spatial Transcriptomics PlatformsUpdated 4 months ago

Zaoqu Liu

Rendered from platforms.Rmd in SpaTalk 2.0.0.
SpaTalk Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in SpaTalk 2.0.0.
SpaTalk: Quick Start GuideUpdated 4 months ago

Zaoqu Liu, Xin Shao

Rendered from SpaTalk.Rmd in SpaTalk 2.0.0.
Algorithm Theory and Mathematical FrameworkUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in METAFLUX 2.2.0.
Introduction to METAFLUXUpdated 4 months ago

Zaoqu Liu

Rendered from introduction.Rmd in METAFLUX 2.2.0.
Single-Cell RNA-seq Metabolic Flux AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from singlecell_analysis.Rmd in METAFLUX 2.2.0.
Multi-Sample AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from multi-sample.Rmd in fastCNV 2.0.0.
Algorithm and Statistical MethodsUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in iTALK 0.1.1.
Cross-Species AnalysisUpdated 4 months ago

Zaoqu Liu

Rendered from species-conversion.Rmd in iTALK 0.1.1.
SpaTalk Advanced UsageUpdated 4 months ago

Zaoqu Liu

Rendered from advanced.Rmd in SpaTalk 2.0.0.
SpaTalk Algorithm: Methodological FrameworkUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in SpaTalk 2.0.0.
Cell-cell communication for single-cell resolution spatial transcriptomics dataUpdated 4 months ago

Zaoqu Liu

Rendered from stCCC.Rmd in SecAct 1.0.1.
Cell-cell communication mediated by secreted proteins from scRNA-Seq dataUpdated 4 months ago

Zaoqu Liu

Rendered from scCCC.Rmd in SecAct 1.0.1.
Clinical relevance of secreted proteins in a large patient cohortUpdated 4 months ago

Zaoqu Liu

Rendered from bulkCohort.Rmd in SecAct 1.0.1.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in SecAct 1.0.1.
Secreted protein signaling activity change between two phenotypesUpdated 4 months ago

Zaoqu Liu

Rendered from bulkChange.Rmd in SecAct 1.0.1.
Secreted protein signaling activity for distinct cell states from scRNA-Seq dataUpdated 4 months ago

Zaoqu Liu

Rendered from scState.Rmd in SecAct 1.0.1.
Signaling patterns and velocities for multi-cellular spatial transcriptomics dataUpdated 4 months ago

Zaoqu Liu

Rendered from stPattern.Rmd in SecAct 1.0.1.
Visualization GalleryUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in SecAct 1.0.1.
Case Study: Binary ClassificationUpdated 4 months ago

Zaoqu Liu, Aimin Xie

Rendered from case-binary.Rmd in scPAS 1.0.4.
Case Study: Cancer Survival AnalysisUpdated 4 months ago

Zaoqu Liu, Aimin Xie

Rendered from case-survival.Rmd in scPAS 1.0.4.
scPAS : Single-Cell Phenotype-Associated Subpopulation identifierUpdated 4 months ago

Aimin Xie

Rendered from scPAS_Tutorial.Rmd in scPAS 1.0.4.
Algorithm and Mathematical BackgroundUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in SCENT 2.0.0.
Performance BenchmarkUpdated 4 months ago

Zaoqu Liu

Rendered from benchmark.Rmd in SCENT 2.0.0.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in SCENT 2.0.0.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in SCENT 2.0.0.
Advanced Usage and Best PracticesUpdated 4 months ago

Zaoqu Liu

Rendered from advanced-usage.Rmd in scGate 1.7.2.
Algorithm and Mathematical FrameworkUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm.Rmd in scGate 1.7.2.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in scGate 1.7.2.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in scGate 1.7.2.
Algorithm and MethodologyUpdated 4 months ago

Zaoqu Liu, Aimin Xie

Rendered from algorithm.Rmd in scPAS 1.0.4.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu, Aimin Xie

Rendered from quick-start.Rmd in scPAS 1.0.4.
Visualization GalleryUpdated 4 months ago

Zaoqu Liu, Aimin Xie

Rendered from visualization.Rmd in scPAS 1.0.4.
Advanced Usage and Parameter TuningUpdated 4 months ago

Zaoqu Liu

Rendered from advanced-usage.Rmd in scTenifoldKnk 2.1.0.
Algorithm Theory and Mathematical FoundationUpdated 4 months ago

Zaoqu Liu

Rendered from algorithm-theory.Rmd in scTenifoldKnk 2.1.0.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in scTenifoldKnk 2.1.0.
Result Interpretation GuideUpdated 4 months ago

Zaoqu Liu

Rendered from interpretation.Rmd in scTenifoldKnk 2.1.0.
Visualization GuideUpdated 4 months ago

Zaoqu Liu

Rendered from visualization.Rmd in scTenifoldKnk 2.1.0.
SVG: A Comprehensive R Package for Spatially Variable Gene DetectionUpdated 4 months ago

Zaoqu Liu

Rendered from SVG-introduction.Rmd in SVG 1.0.0.
Best Practices for Production UseUpdated 4 months ago

Zaoqu Liu

Rendered from best-practices.Rmd in SafeMapper 1.0.0.
Core Concepts and ArchitectureUpdated 4 months ago

Zaoqu Liu

Rendered from core-concepts.Rmd in SafeMapper 1.0.0.
Error Handling StrategiesUpdated 4 months ago

Zaoqu Liu

Rendered from error-handling.Rmd in SafeMapper 1.0.0.
Map Functions: A Complete GuideUpdated 4 months ago

Zaoqu Liu

Rendered from map-functions.Rmd in SafeMapper 1.0.0.
Parallel Processing with SafeMapperUpdated 4 months ago

Zaoqu Liu

Rendered from parallel-processing.Rmd in SafeMapper 1.0.0.
Quick Start: Get Up and Running in 5 MinutesUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in SafeMapper 1.0.0.
Real-World ExamplesUpdated 4 months ago

Zaoqu Liu

Rendered from real-world-examples.Rmd in SafeMapper 1.0.0.
Session and Configuration ManagementUpdated 4 months ago

Zaoqu Liu

Rendered from session-management.Rmd in SafeMapper 1.0.0.
BioTransition: Dynamic Network Biomarker Analysis for Critical Transition DetectionUpdated 4 months ago

Zaoqu Liu

Rendered from BioTransition.Rmd in BioTransition 2.0.0.
Quick Start GuideUpdated 4 months ago

Zaoqu Liu

Rendered from quick-start.Rmd in scMetaLink 0.99.1.
Theory & MethodsUpdated 4 months ago

Zaoqu Liu

Rendered from theory.Rmd in scMetaLink 0.99.1.